astrovascpy.io¶

Functions

`load_graph`(filename)	Load a vasculature from file.
`load_graph_from_bin`(filename)	Loading of a graph from a binary file using pickle.
`load_graph_from_csv`(node_filename, edge_filename)	Loading of node dataset and edge dataset using pandas.
`load_graph_from_h5`(filename)	Loading of a graph from a .h5 using PointVasculature.load_sonata.

astrovascpy.io.load_graph(filename)¶

Load a vasculature from file.

Parameters:: filename (str) – vasculature dataset.
Returns:: graph containing point vasculature skeleton.
Return type:: utils.Graph
Raises:: BloodFlowError – if the file object identified by filename is not in h5 format.

astrovascpy.io.load_graph_from_bin(filename)¶

Loading of a graph from a binary file using pickle. :param filename: vasculature dataset path. :type filename: str

astrovascpy.io.load_graph_from_csv(node_filename, edge_filename)¶

Loading of node dataset and edge dataset using pandas. It creates a PointVasculature graph object.

Parameters:

Returns:

graph containing point vasculature skeleton.

Return type:

utils.Graph

astrovascpy.io.load_graph_from_h5(filename)¶

Loading of a graph from a .h5 using PointVasculature.load_sonata. :param filename: vasculature dataset path. :type filename: str